FileBasedProject.PublishProject() succeeds but Studio indicates publish failed

We are having intermittent problems using the FIleBasedProject creation API. For some of the created projects we are unable to open in Studio. The error information states:

"The project with ID {0} can not be opened becasue it was not successfully published to the server"

However, the result of the PublishProject() call has a status of PublicationStatus.Published

Why are the projects not openable?

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